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  4. 質體清單
維持者:  幸華
存放位置: [-20C冰箱][3層][1櫃][Master box盒][?格]
 
*過去的質體清單有，但目前找不到存放位置
若要定序、畫map，需要重訂primer
我以其他backbone也是pcDNA6.2的質體map找primer序列
推估primer序列可以用AACCTCTTACGTGCCGATCAAC，但尚未訂購primer
Plasmid datasheet: 
Gene (Insert): http://www.mirbase.org/cgi-bin/mature.pl?mature_acc=MIMAT0003887
DNA sequencing: 需訂購primer並送定序才能得知
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    1. 知識庫
    2. 目錄總覽
    3. 實驗室資料夾
    4. 質體清單
    資料夾名稱
    質體清單
    發表人
    趙幸華
    單位
    賴亮全教授
    建立
    2019-09-10 18:16:40
    最近修訂
    2019-09-10 18:22:48
    1. 1.
      質體(plasmid/vector)清單
      Responsive image
    2. 2.
      巧宜 質體
      1. 2.1
        pMIR-REPORT-DANCR
      2. 2.2
        pMIR-REPORT-DANCR; 7328 bp S1 mutation
      3. 2.3
        pMIR-REPORT-DANCR; 7328 bp S2 mutation
      4. 2.4
        pMIR-REPORT-DANCR; 7328 bp S12 mutation
      5. 2.5
        pMIR-REPORT-c-Myb 3'UTR
      6. 2.6
        pMIR-REPORT-c-Myb 3' UTR 7613bp (S1 mutationc-myb 3'UTR mut-233-239)
      7. 2.7
        pMIR-REPORT-c-Myb 3' UTR 7613bp (S2 mutationc-myb 3'UTR mut-1157-1164)
      8. 2.8
        pMIR-REPORT-c-Myb 3' UTR 7613bp (S12 mutationc-myb 3'UTR mut-1157-1164)
    3. 3.
      Empty vector
      1. 3.1
        pMD2.G
      2. 3.2
        psPAX2
      3. 3.3
        pLKO_TR005
      4. 3.4
        pMIR-REPORT luciferase
      5. 3.5
        pcDNA3.1
      6. 3.6
        pcDNA3.1(+) (from 14F 生醫資源中心)
      7. 3.7
        pmirGLO Dual Luciferase miRNATarget Expression Vector
    4. 4.
      SEMA5A
      1. 4.1
        pN1-Sema5A-ICD-18xHis
      2. 4.2
        pN1-18xHis-Sema5A-ECD
      3. 4.3
        pN1-Sema5A-ECD-FLAG;
    5. 5.
      NDRG1
      1. 5.1
        pGL3-NDRG1-OT1 promoter
      2. 5.2
        pcDNA3.1(+)-NDRG1-OT1_v4
      3. 5.3
        pcDNA3.1(+)-NDRG1
      4. 5.4
        pGL3-basic/NDRG1 promoter -800/+353(L)
      5. 5.5
        pGL3-basic/NDRG1 promoter -378/+353(S)
      6. 5.6
        pGL3-basic/NDRG1 promoter -245/+353(XS)
      7. 5.7
        pGL3-basic/NDRG1 promoter +21/+353(XSM)
      8. 5.8
        pGL3-basic/NDRG1 promoter (M)
      9. 5.9
        pGL3 OT1 promoter s1M
      10. 5.10
        pGL3 OT1 promoter s2M
      11. 5.11
        pGL3 OT1 promoter s1+2M
      12. 5.12
        pGL3-basic vector
      13. 5.13
        pMIR-REPORT/NDRG1 3'UTR
    6. 6.
      MicroRNA
      1. 6.1
        pcDNA6.2 miR 2276
      2. 6.2
        pcDNA6.2 miR 1282
      3. 6.3
        pcDNA6.2 miR 501
      4. 6.4
        pcDNA6.2 miR 449a
      5. 6.5
        pcDNA6.2-GW/EmGFP-miR-neg-miR-769-3p
      6. 6.6
        pcDNA6.2-GW_EmGFP-miR-neg
      7. 6.7
        pcDNA6.2-GW_EmGFP-hsa-miR-875-3p
      8. 6.8
        pcDNA6.2-GW_EmGFP-hsa-miR-3922-5p
    7. 7.
      LncRNA
      1. 7.1
        pcDNA3.1-lnc-ENO2-OT1(LRRC23-2-1)
      2. 7.2
        pCMV_MALAT1
      3. 7.3
        pLKO_TRC005_shMALAT1 #1
      4. 7.4
        pLKO_TRC005_shMALAT1 #2
      5. 7.5
        pLKO_TRC005_shMALAT1 #4
      6. 7.6
        pLKO_TRC005_shNDRG1-OT1 #2
      7. 7.7
        pLKO_TRC005_shNDRG1-OT1 #3
      8. 7.8
        pcDNA3.1(+)OT1-263bp(1-263)
      9. 7.9
        pcDNA3.1(+)OT1-245bp(264-508)
      10. 7.10
        pcDNA3.1(+)-OT1-149bp (1-149)
      11. 7.11
        pcDNA3.1(+)-OT1-114bp (150-263)
      12. 7.12
        pcDNA3.1(+)-OT1-129bp (264-392)
      13. 7.13
        pcDNA3.1(+)-OT1-116bp (393-508)
      14. 7.14
        pcDNA3.1 / ZEO(+) NDRG1-OT1_v4 with HA and FLAG tag -1
      15. 7.15
        pcDNA3.1 / ZEO(+) NDRG1-OT1_v4 with HA and FLAG tag -2
      16. 7.16
        pcDNA3.1 / ZEO(+) NDRG1-OT1_v4 with HA and FLAG tag -3
      17. 7.17
        pcDNA3.1 / ZEO(+) NDRG1-OT1_v4 with HA and FLAG tag -4
      18. 7.18
        pcDNA3.1-NONHSAT135851.2 (MTORT1) (peptide validation)
      19. 7.19
        pcDNA3.1(+)-NONHSAT167136.1-FLAG
      20. 7.20
        pcDNA3.1(+)-NONHSAT167136.1
    8. 8.
      CircRNA
      1. 8.1
        pCIRC2T7-mCherry
      2. 8.2
        pCIRC2T7-circAAGAB
      3. 8.3
        pCIRC2T7-HA-circAAGAB-Flag
      4. 8.4
        pCIRC2T7-circSFMBT2
      5. 8.5
        pCIRC2T7-HA-SFMBT2-FLAG
      6. 8.6
        pcDNA3.1(+)-Alu-circSFMBT2
      7. 8.7
        pcDNA3.1(+)-Alu-circSFMBT2 both truncated
      8. 8.8
        pcDNA3.1(+)-Alu-circSFMBT2-AluSc5 truncated-EGFP
      9. 8.9
        pcDNA3.1(+)-Alu-circSFMBT2-AluY truncated-EGFP
      10. 8.10
        pcDNA3.1(+)-Alu-circSFMBT2-both truncated-EGFP
      11. 8.11
        pcDNA3.1(+)-Alu-circSFMBT2-EGFP
      12. 8.12
        pcDNA3.1(+)-circACVR2A
        1. 8.12.1
          pcDNA3.1(+)-circACVR2A
    9. 9.
      Others
      1. 9.1
        HA-HIF2alpha-P405A/P531A-pcDNA3(P405A/P531A mutation 用於過表現HIF-2a且在normoxia下不會被分解)
      2. 9.2
        HA-HIF1alpha P402A/P564A-pcDNA3 (P402A/P564A mutation 用於過表現HIF-1a且在normoxia下不會被分解)
      3. 9.3
        pcDNA3 HIF2A
      4. 9.4
        IRES-Luc-NDRG1
      5. 9.5
        IRES-Luc-Empty
      6. 9.6
        pGFP-TCL
      7. 9.7
        HA tag positive control (Western Blot:35kDa)
      8. 9.8
        pcDNA 3.1(+)-FUS
      9. 9.9
        pcDNA3.1(+)-hPABPC1
      10. 9.10
        pCDH-CMV-MYC-EF1-Puro
    10. 10.
      luciferase contruct - pMIR
      1. 10.1
        pmirGLO Dual Luciferase miRNATarget Expression Vector
      2. 10.2
        pmirGLO _MALAT1 S1 for miR-3064
      3. 10.3
        pmirGLO _MALAT1 S1mut for miR-3064
      4. 10.4
        pmirGLO _MALAT1 S2 for miR-3064
      5. 10.5
        pmirGLO _MALAT1 S2mut for miR-3064
      6. 10.6
        pMIR-REPORT-NDRG1-OT1
      7. 10.7
        pMIR-REPORT-NDRG1-OT1-mutation 1 (for miR-875-3p)
      8. 10.8
        pMIR-REPORT-NDRG1-OT1-mutation 2 (for miR-875-3p)
      9. 10.9
        pMIR-REPORT-NDRG1-OT1-mutation 1+2 (for miR-875-3p)
      10. 10.10
        pMIR-REPORT Luc-MTORT1 (NONHSAT135851.2)
      11. 10.11
        pMIR-REPORT Luc-MTORT1 mutant
      12. 10.12
        pmirGLO _basic_puma from 湖孟君老師的學生賴財春
      13. 10.13
        pmirGLO-SFMBT2-HRE
      14. 10.14
        pmirGLO-SFMBT2-HRE1 mutant
      15. 10.15
        pmirGLO-SFMBT2-HRE3 mutant
      16. 10.16
        pmirGLO-SFMBT2-HRE1-HRE3 mutant
    11. 11.
      MALAT1 promoter luciferase
      1. 11.1
        pGL3-Basic-hMALAT1 (-2000~+24) 6777 bp
      2. 11.2
        pGL3-Basic-hMALAT1 (-2000~+24) mutant 1 6777 bp
      3. 11.3
        pGL3-Basic-hMALAT1 (-2000~+24) mutant 2 6777 bp
      4. 11.4
        pGL3-Basic-hMALAT1 (-2000~+24) mutant 3 6777 bp
      5. 11.5
        pGL3-Basic-hMALAT1 (-2000_+24) mutant 1_2_3
      6. 11.6
        hsa-miR-3064 mimic
    12. 12.
      pCDH-CMV-hMETTL3-EF1-Puro (over express METTL3)

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